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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015895787.1_cds_XP_016447762.1_42488
CDS Infomation

[gene=LOC107772805] [db_xref=GeneID:107772805] [protein=NADP-dependent malic enzyme, chloroplastic] [protein_id=XP_016447762.1] [location=join(55110..55139,55654..55928,56817..56937,57024..57098,57345..57496,57590..57695,57872..57937,59402..59497,59600..59671,59755..59838,59966..60064,60373..60420,60539..60592,60680..60778,60928..61017,61130..61207,61338..61412,61535..61625,62285..62413,62506..62594)] [gbkey=CDS]
Sequence

ATGTTCTCCTTGAATGGAAGCAGTTTTACGAATAATTCGCTATCTGGGGTTTCAAGATGT
TTGACTCAGTCAAGCAGAAGAGGAGTTTCAGGTCCTATGGTTGTAGTAGCAGCTGTGAAC
TCAAATGGTAAACCAGGAGACAGAAATGTGAGTGTTTTGGTGGAGAATTCTATGAAGGAA
AGTGCTGCAGCTCCGGTAGAGAAGGAGATTAAATCTACTGTGACAGGTGGAGTTGGGGAT
GTTTATGGTGAGGATAGTGCCACTGAAGATCAGTCCATCACCCCTTGGACCCTTTCTGTT
GCTAGTGGTTACTCATTGTTGCGTAATCCGCACTATAACAAAGGGCTTGCTTTCAGTGAG
AAAGAGAGAGATTCCCACTACTTGCGCGGTCTTCTTCCTCCGGTCGTTGTTAATCATGAC
CTTCAGGTCAAGAAAATGATGAACAATCTCCGTCAGTATGAGGTACCACTGCAAAGATAC
ATAGCCATGATGGATATTCAGGAGATGAATGAAAGGCTTTACTACAAGCTTCTTATGGAC
AACGTTGAGGAGCTGCTTCCTATAGTTTACACTCCAACTGTAGGTGAAGCATGCCAGAAA
TATGGCAGCATCTTCAGGCGTCCTCAAGGTCTTTTTATCAGCTTGAAAGAAAAAGGCAAA
ATTAATGAGGTATTAAAAAATTGGCCTGAGAGGAAAATTCAAGTTATTGTTGTTACTGAT
GGAGAACGAATTCTGGGCCTTGGTGACCTTGGTTGCCAGGGAATGGGGATTCCAGTAGGC
AAGCTCTCTTTATACACTGCTCTGGGAGGCATTCGTCCATCAGCTTGCTTGCCCATTACC
ATTGATGTGGGTACAAACAACGAGGATTTGTTGAACGACGAATTTTACATTGGACTCAGG
CAAAGAAGAGCTAGAGGACAGGAATATGCCGAACTTTTTGATGAATTTATGTATGCTGTC
AAGCAGAATTATGGGGAGAAAGTGCTCATTCAGTTTGAAGACTTTGCAAATCATAATGCA
TTTGACCTCCTTGCAAAGTACGGAACTAGCCACCTTGTTTTCAATGATGACATACAGGGA
ACAGCATCTGTGGTCCTCGCAGGGCTCATGGCAGCATTGCAATTGGTTGGAGGAACCTTG
TCTGAACATACATTCTTATTCCTTGGAGCAGGGGAGGCTGGAACAGGTATAGCAGAACTC
ATAGCTCTTGAAATGTCAAAGCAGACTGGAATCCCTCTAGAAGAGACTCGTAAGAAAATT
TGGATGTTGGATTCTAAGGGGCTGATTGTTAATTCTCGCATGGAGTCGCTTCAACATTTT
AAGAGGCCCTGGGCACATGACCACGAACCAGTAAAAGATCTGGTGAATGCTGTCAAGTCA
ATTAAGCCAACAGTTTTGATTGGGTCTTCTGGAGCTGGGAGAACATTTACTAAAGAAGTT
GTACAAGCTATGGCAACATTCAATGAGAAACCAATTATTTTTGCCCTCTCCAATCCAACG
TCACAGTCTGAATGTACTGCTGAAGAAGCTTATACCTGGAGTGAGGGGCGAGCCATTTTT
GCTAGCGGGAGTCCGTTTGCCCCAGTTGAGTACAACGGGAAGATCTACGCGTCCGGTCAG
GCAAATAATGCATATATCTTCCCTGGGTTTGGTCTAGGACTGATAATTTCTGGTGCAATT
CGTGTCCACGATGACATGCTCCTGGCAGCCTCGGAAGCTTTAGCAGAGCAAGTTAGTCAA
GAGAACTTTGAGAAGGGGCTCATATACCCGCCATTTACCAACATAAGAAAGATTTCAGCC
AACATAGCTGCCAAAGTGGCAGCTAAAGCATATGAACTAGGTTTGGCCACTCGTCTACCG
GAACCTGCGAACCTAGTAGCATATGCAGAGAGCTGTATGTACAGCCCCGCTTACCGCAGC
TATCGTTGA

Peptide Sequence

PEP ID

XP_016447762.1
PEP Infomation

PREDICTED: NADP-dependent malic enzyme, chloroplastic [Nicotiana tabacum]
Sequence

MFSLNGSSFTNNSLSGVSRCLTQSSRRGVSGPMVVVAAVNSNGKPGDRNVSVLVENSMKE
SAAAPVEKEIKSTVTGGVGDVYGEDSATEDQSITPWTLSVASGYSLLRNPHYNKGLAFSE
KERDSHYLRGLLPPVVVNHDLQVKKMMNNLRQYEVPLQRYIAMMDIQEMNERLYYKLLMD
NVEELLPIVYTPTVGEACQKYGSIFRRPQGLFISLKEKGKINEVLKNWPERKIQVIVVTD
GERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPITIDVGTNNEDLLNDEFYIGLR
QRRARGQEYAELFDEFMYAVKQNYGEKVLIQFEDFANHNAFDLLAKYGTSHLVFNDDIQG
TASVVLAGLMAALQLVGGTLSEHTFLFLGAGEAGTGIAELIALEMSKQTGIPLEETRKKI
WMLDSKGLIVNSRMESLQHFKRPWAHDHEPVKDLVNAVKSIKPTVLIGSSGAGRTFTKEV
VQAMATFNEKPIIFALSNPTSQSECTAEEAYTWSEGRAIFASGSPFAPVEYNGKIYASGQ
ANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALAEQVSQENFEKGLIYPPFTNIRKISA
NIAAKVAAKAYELGLATRLPEPANLVAYAESCMYSPAYRSYR

Transcript Sequence

Gene sequence data has not been registered.